Discovery of a potent MLL1 and WDR5 protein-protein interaction inhibitor with in vivo antitumor activity

Eur J Med Chem. 2021 Nov 5:223:113677. doi: 10.1016/j.ejmech.2021.113677. Epub 2021 Jun 28.

Abstract

MLL1-WDR5 interaction is essential for the formation of MLL core complex and its H3K4 methyltransferase activity. Disrupting MLL1-WDR5 interaction has been proposed as a potential therapeutic approach in the treatment of leukemia. A "toolkit" of well-characterized chemical probe will allow exploring animal studies. Based on a specific MLL1-WDR5 PPI inhibitor (DDO-2117), which was previously reported by our group, we conducted a bioisosterism approach by click chemistry to discover novel phenyltriazole scaffold MLL1-WDR5 interaction blockers. Here, our efforts resulted in the best inhibitor 24 (DDO-2093) with high binding affinity (Kd = 11.6 nM) and with improved drug-like properties. Both in vitro and in vivo assays revealed 24 could efficiently block the MLL1-WDR5 interaction. Furthermore, 24 significantly suppressed tumor growth in the MV4-11 xenograft mouse model and showed a favorable safety profile. We propose 24 as a chemical probe that is suitable for in vivo pharmacodynamic and biological studies of MLL1-WDR5 interaction.

Keywords: Antitumor; MLL1 HMT activity; MLL1-WDR5 interaction; Phenyltriazole scaffold inhibitor.

MeSH terms

  • Animals
  • Antineoplastic Agents / chemistry*
  • Antineoplastic Agents / metabolism
  • Antineoplastic Agents / pharmacology
  • Antineoplastic Agents / therapeutic use
  • Binding Sites
  • Cell Line, Tumor
  • Cell Proliferation / drug effects
  • Drug Design
  • Drug Screening Assays, Antitumor
  • Histone-Lysine N-Methyltransferase / antagonists & inhibitors
  • Histone-Lysine N-Methyltransferase / metabolism*
  • Humans
  • Intracellular Signaling Peptides and Proteins / antagonists & inhibitors
  • Intracellular Signaling Peptides and Proteins / metabolism*
  • Kinetics
  • Mice
  • Mice, Nude
  • Molecular Docking Simulation
  • Myeloid-Lymphoid Leukemia Protein / antagonists & inhibitors
  • Myeloid-Lymphoid Leukemia Protein / metabolism*
  • Neoplasms / drug therapy
  • Neoplasms / pathology
  • Protein Binding
  • Protein Interaction Maps / drug effects
  • Structure-Activity Relationship
  • Transplantation, Heterologous
  • Triazoles / chemistry
  • Triazoles / metabolism
  • Triazoles / pharmacology
  • Triazoles / therapeutic use

Substances

  • Antineoplastic Agents
  • Intracellular Signaling Peptides and Proteins
  • KMT2A protein, human
  • Triazoles
  • WDR5 protein, human
  • Myeloid-Lymphoid Leukemia Protein
  • Histone-Lysine N-Methyltransferase